Arcangelisia flava as a SARS-CoV-2 MPro Inhibitor: Molecular docking, ADME studies, and toxicity prediction

Rizki Fadhil Pratama, Mohammad and Suratno, Suratno and Mulyani, Evi and Hameed Hasan, Aso and Mahal, Ahmed and Aslan Nasibova, Tohfa and Perekhoda, Lina O. and Santoso, Broto and Poerwono, Hadi and Siswodihardjo, Siswandono (2025) Arcangelisia flava as a SARS-CoV-2 MPro Inhibitor: Molecular docking, ADME studies, and toxicity prediction. Letters in Applied NanoBioScience, 14 (2): 70. ISSN 2284-6808 (online)

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Abstract

This study aims to identify active compounds of Arcangelisia flava, which can potentially inhibit SARS-CoV-2 MPro, through in silico studies. Molecular docking was carried out on 11 primary known metabolites of A. flava against the SARS-CoV-2 MPro receptor with remdesivir as a reference compound. All the ligands were analyzed for their ADME profile using a combination of SwissADME and pkCSM. The toxicity profile of each ligand was then predicted by ProTox-II. The best docking results were shown by 6-hydroxyfibraurin with a difference in the free energy of binding 0.48 kcal/mol higher than remdesivir, while the highest similarity interaction with remdesivir was shown by berberine with 52.27%. All ligands showed relatively similar ADME profiles and acceptable drug-likeness properties, including toxicity. In conclusion, 6-hydroxyfibraurin has the potential as a SARS-CoV-2 MPro inhibitor with acceptable ADME and toxicity profiles. Further in vitro and in vivo studies are needed to prove the compound's activity.

Item Type: Article
Uncontrolled Keywords: 6-hydroxyfibraurin; Arcangelisia flava; Covid-19; Molecular docking; SARS-CoV-2 MPro
Subjects: Q Science > QD Chemistry
Q Science > QK Botany
Q Science > QR Microbiology > QR355 Virology
R Medicine > RM Therapeutics. Pharmacology
Divisions: Department of Medical Biochemical Analysis > Research papers
Depositing User: ePrints Depositor
Date Deposited: 15 Aug 2025 21:02
Last Modified: 15 Aug 2025 21:02
URI: https://eprints.cihanuniversity.edu.iq/id/eprint/4812

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